Hi,
I've the same problem, and I think that you could do a NDVI. After try to find out for each scene the NDVI value that can discriminate vegetation from rocks. Use this value to build a mask: for exemple NDVI>0.5 = vegetation (the value depends from season and type of vegetation), NDVI
The ratios don't change if you do the ratio from masked image or from original image (each one in reflectance value).
I found that lichens have low NDVI ratios, similar to rocks. So if you have a cliff with lichens the spectral signatures are more influenced from lichens than rocks.
I'm performing some script that can be helpfull.
Contact me, I'm a PhD student in Padova.
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