Dear Maryse,
Sometimes even with precise orbital information, residual orbital fringes can remain. It sounds like that may be what is happening for you. Ideally, the Refinement and Reflattening step will remove orbital fringes. Perhaps the GCPs that you provided for that step were not located on orbital fringes, and so those fringes were not removed well?
There is a document on the Sarmap web site (developers of SARscape) about how to choose GCPs for different purposes. It might help to read the section there about GCPs for persistent scattering:
http://sarmap.ch/tutorials/GCP_Manual.pdf Best,
Peg Shippert
Harris Geospatial